Dear all,
Thanks for the nice package.
Is there anyway to convert print_summary()
to pandas data frame.
I can make an arviz object but for large problems it takes actually longer than my sampling .
Thanks,
Mahdi
@mahdik You can use summary utility for samples from mcmc.get_samples(group_by_chain=True)
to get a dict of stats. Then you can use some pandas functions to convert that dict to a data frame I guess.
Actually, numpyro.diagnostics.summary(mcmc.get_samples(group_by_chain=True))
took as long as using arviz.from_numpyro(mcmc)
. While mcmc.print_summary()
is printing almost instantly.
Thanks,
MK