Error in Gaussian Process Example

GMCobraz · July 17, 2021, 5:03pm

Dear all,

Have anyone try the gaussian process example in numpyro documentation?
https://num.pyro.ai/en/stable/examples/gp.html

Unfortunately I got this error when I try to run the example.
sage: ipykernel_launcher.py [-h]
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NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP NUM_WARMUP]
[–num-chains NUM_CHAINS]
[–thinning THINNING THINNING]
[–num-data NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA NUM_DATA]
[–device DEVICE]
[–init-strategy {median,feasible,value,uniform,sample}]
ipykernel_launcher.py: error: unrecognized arguments: -f /root/.local/share/jupyter/runtime/kernel-5ed68d00-54d1-448a-ae5a-b2756a0fedf0.json
An exception has occurred, use %tb to see the full traceback.

SystemExit: 2
/usr/local/lib/python3.7/dist-packages/IPython/core/interactiveshell.py:2890: UserWarning: To exit: use ‘exit’, ‘quit’, or Ctrl-D.
warn(“To exit: use ‘exit’, ‘quit’, or Ctrl-D.”, stacklevel=1)

Please help.
Thank you very much

fehiepsi · July 17, 2021, 9:05pm

This might be a bug. Could you check if this solution resolves the issue? You might raise issues in github to follow-up easier.

GMCobraz · July 18, 2021, 7:37pm

Hi @fehiepsi ,

Good day.
The error still not solve even I install ipywidgets.
But if we refer to this forum,

After I replace args = parser.parse_args() with
args, unknown = parser.parse_known_args()

The error solved.
In conclusion, installed ipywidgets + the small modification to the code solve the problem.
Hopefully you can update on the documentation.

Thank you very much.

Python 3.7.10 + miniconda(jupyter notebook)
numpyro v0.6.0
jax v0.2.10
jaxlib v0.1.62+cuda101

fehiepsi · July 18, 2021, 8:26pm

Whoa, I didn’t know this cool trick. Thanks! Do you want to submit this enhancement across all examples? I have created this fr.